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Species belonging to selected taxon:

Carica papaya



ABOUT THIS RECORD

ID: MNEST002876
species: Carica papaya
miRNA family: MIR390
source: miRNEST

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGCTCAGGAGGGATAGCGCC

miRNA*
CGCTATCCATCCTGAGTTTCA

mismatches: 2
bulges: 0

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pre-miRNA
AAAAGTAGAGAAGAATCTGTTAAGCTCAGGAGGGATAGCGCCATGGCGGGTCTTGAATCTTGATCTTCATTTGCGCTATCCATCCTGAGTTTCACTGCTT
CTTCTTACTCTC


dot-bracket secondary structure
.......((((((((...((.((((((((((.(((((((((.((((.(((((.........)))))))))..))))))))).)))))))))).))...))
))))))......



SIMILARITIES
miRBase csi-MIR390: 1e-16

PMRD ghr-miR390b: 0.00000000000002

microPC miR390: 3e-35
UniProt no hits

RFAM MIR390: 4e-50
most similar mature miRNAs

Identical with: miR390 from microPC (MNEST045151)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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